How do I manage my FreshBooks Payments account?

FreshBooks Payments powered by Stripe is available for accounts based in Canada and the United States. Once FreshBooks Payments is set up, you can manage your FreshBooks Payments account anytime.
 
If you haven’t set up FreshBooks Payments yet, review How do I accept online payments with FreshBooks Payments powered by Stripe? first.
 
 

Access Your FreshBooks Payments Account

To access your FreshBooks Payments account, use the below steps:
  1. Go directly to Online Payments here, or select the Settings section
  2. Under Connections and Integrations, select Online Payments.
From here, you can manage your FreshBooks Payments account details:
FreshBooks Payments account with information displayed in online payments settings.
  • Online Payments - Displays your FreshBooks Payments account status
    • Active - Your FreshBooks Payments account is in good standing and can process online payments
    • Inactive - Your FreshBooks Payments account is unable to process online payments, log into your FreshBooks Payments account for more information
  • Payouts - Displays your payout status
    • Active - No disruptions to payouts being sent to your connected bank account
    • Inactive - Your payouts are paused, log into your FreshBooks Payments account for more information
  • Transaction Information - Displays default transaction fees, if eligible, your email from FreshBooks will contain your specific pricing
  • Payout Account - If needed, select the Edit Payout Account link to update your connected bank account
  • Payout Schedule - Your current payout schedule, including any delays
  • Edit FreshBooks Payments Info - Select Edit FreshBooks Payments Info to modify any of your onboarding details, including your descriptor shown on clients’ statements
  • Visit Stripe Dashboard - Select Visit Stripe Dashboard to log into your FreshBooks Payments account to view payments and disputes
 
Note: If you’re looking to process a refund for a payment made through FreshBooks Payments, review How do I refund a payment?.
 

Payouts

Payouts, also known as payment settlements, are how money from your clients gets deposited into your bank account.
 

Payout Schedule and Speed

The payout schedule determines how often FreshBooks Payments sends money to your bank account. Payouts are set to daily automatic by default.
 
Fraud attempts are higher during the holiday season. We’ve taken extra measures to safeguard your business, which may delay payouts.
 
Payout speed is the amount of time it takes for your funds to become available, and is represented as T+X days:
  • T - Refers to the transaction time, as in the time of the original payment confirmation or capture
    • Payments can be confirmed or captured anytime between 8 am - 5 pm ET, Monday to Friday
  • X - Refers to the number of business days required before the funds can become available for payout
  • Most banks deposit payouts into your bank account as soon as they’re received, though some might take a few extra days to make the payouts available especially if it’s received on bank holidays or weekends
Payout speeds will vary depending on whether or not it’s your first payment, how your client paid, and when the payment was processed:
Payment TypePayout Speed
Transactions until first payoutT+7
Bank Transfers (ACH, US only)T+4
Credit CardsT+2
Pre-Authorized Debit (PAD, Canada only, for some accounts*)T+4
*Pre-Authorized Debit is only available for users that previously moved over from WePay to FreshBooks Payments powered by Stripe.

Payout Balances

There are two payout balances to help you track funds that are available for payouts, and funds that are on the way to your bank account.
 
The Online Payments sub-section is only available to specific users currently. Our product team is working on making the Online Payments sub-section available for all FreshBooks Payments users in the near future.
 
To access the Payout Overview, use these steps:
  1. Select the Payments section
  2. Then select the Online Payments sub-section underneath.
    Online payments sub-section selected underneath payments.
 
Each payout balance is broken down into the below:
Payout Overview with two balances displayed.
  • Future Payouts - The total of settled funds that are available for payouts
    • Credit card payments are available almost immediately for instant payouts
    • Bank transfer payments require T+4 business days before they can be settled into this balance or for instant payouts
    • Pay Out Now - Only available with Instant Payouts
  • In Transit to Bank - Funds in standard payouts after deducting fees that are in flight to the bank
 
The Payout Process
  1. An online payment is received on an invoice
    1. Credit card payments go to Future payouts
    2. Bank transfer payments that have finished processing after T+4 will go to Future payouts
  2. If needed, credit card payments and settled bank transfers in Future payouts can be used to request Instant Payouts
    1. If an instant payout is requested, the balance decreases from Future payouts and a confirmation email notification is sent to the owner of the FreshBooks ​​Payments account
  3. When a standard payout goes out, funds move from Future payouts to In transit to bank
  4. Once the standard payout reaches the bank, the balance decreases from In transit to bank.
 

Payout History

The Payout History section displays details on each payout being sent to the connected bank in your FreshBooks Payments account. This includes both standard payouts and Instant Payouts.
 
The Online Payments sub-section is only available to specific users currently. Our product team is working on making the Online Payments sub-section available for all FreshBooks Payments users in the near future.
 
To access the Payout History section, use these steps:
  1. Select the Payments section
  2. Then select the Online Payments sub-section underneath.
    Online payments sub-section selected underneath payments.
  3. Next, select the View Payout History link.
    View payout history link above in transit balance.
 
To adjust your view of your payouts, select the Filters button. From there, you can change:
Payout history list with filters available.
  • Amount - Choose between is equal to, is between, is greater than, or is less than, and specify an amount
  • Date - Choose a specific date or a range as needed
  • Status - Choose between is paid, is pending or in transit, is failed, or is canceled
  • Method - Choose between Instant or Standard
 
Review Payout Details
To review a specific payout for details including the transactions making up the payout total, select any payout from the list to pull up its payout details, which includes the below:
Detailed information on payout displayed.
  • Bank Information - Lists the bank and currency the payout was sent to
  • Overview - Lists the status, amount, fee, type, method, description, and date paid of the payout
For standard payouts only, the below additional information is provided:
  • Summary - Lists the breakdown of charges, refunds, and adjustments making up the payout total
  • Transactions - Lists the individual payments and refunds that are included in the payout

If needed, select Export in the top right corner of your list of payouts to download a CSV file, with the option to filter by date range and by specific columns.
 

Payout Delays

Payouts can be delayed or paused for a variety of reasons:
  • Account verification requests - More information is required from you and your business before payouts can resume, these can include any of the following:
  • Bank account details incorrect or updated - Updates made to your bank account information will not retroactively apply to payouts already in transit, these are paid out to the old bank account information
  • Incomplete payout due to reserves - If your payout is not paid out in full, this may indicate you have a temporary reserve on your account to ensure coverage for refunds and chargebacks to process
  • Payout date has been changed or postponed - Expected payout dates can be updated to a future date if there are any account verification issues
  • Payout is missing - Banks can add extra days, including weekends and holidays to process payouts
 

Payout Failures for Bank Transfers and PAD Payments

Bank transfers and PAD payments can fail any time after the payment is initiated. These failures can occur for any of the below reasons:
  • Insufficient funds
  • Invalid account number
  • Client disabling debits from their bank account
 
Payment Failure Notes:
  • Payment failures fees are charged for each payment failure
  • If a payment failure occurs after funds have been made available in your FreshBooks Payments balance, the funds are immediately removed from the balance
  • If a payment failure is sent by the bank after payment was successful, a dispute is created with a reason of either insufficient funds, incorrect bank account details, or bank cannot process
 

Disputes and Chargebacks

Disputes, also known as chargebacks, occur when your client contacts their bank or credit card company to question a charge. Common reasons for disputes can include:
  • Credit not processed
  • Duplicate
  • Fraudulent
  • General
  • Product not received
  • Product unacceptable
  • Subscription canceled
  • Unrecognized
 
When a dispute is filed, you have a limited amount of time, usually 7-21 days, to respond to the dispute. The dispute process is as follows:
  1. The disputed amount, along with a non-refundable dispute fee of $15, is debited immediately from your FreshBooks Payments account until the dispute is resolved
  2. If funds are not available in your FreshBooks Payments account, funds are withdrawn from your connected bank account
  3. A notification of the dispute is sent to your email address, along with a message in your FreshBooks account
  4. Select the Respond to Dispute button in the email, or the Go to Stripe button in the banner inside your FreshBooks account on the Dashboard
    Banner showing dispute with go to Stripe button.
  5. Log into your FreshBooks Payments powered by Stripe account
  6. Select the Disputes section, and then select the payment being disputed
  7. Select either:
    1. Counter Dispute to provide evidence to prove that your client is the legitimate purchaser - this can take around 60-75 days to evaluate the evidence and decide the outcome
    2. Accept Dispute to refund the client and close the dispute.
 

Reports

To review which individual payments are in each payout that’s been deposited into your bank account, including a detailed breakdown of gross amount and payment fees, you can use the Stripe Payout Reconciliation report. To run a Payout Reconciliation report, use the below steps:
  1. Go directly to Online Payments here, or select the Settings section
  2. Under Connections and Integrations, select Online Payments
  3. Select the Visit Stripe Dashboard link and log into your Stripe account
  4. Then inside your Stripe dashboard, select the Reports section from the left menu
    Reports section selected in navigation.
  5. In the Reports section, select Payout Reconciliation
    Two reports shown in Stripe reports section.
  6. If needed, adjust the date range at the top
    Payout reconciliation report with filters to adjust date.
  7. Then in the the Payout Reconciliation tile, select the Download button
    Download button for payout reconciliation report.
  8. For Reporting category, choose between All, Charges, or Refunds
  9. Under Columns, choose between Default, All, or Custom
  10. If Custom is selected, check off or uncheck boxes to show or hide specific columns on the report, the below columns are recommended:
    Options to customize format of report including checkboxes for specific columns.
    • Automatic Payout ID
    • Created (requested time zone)
    • Gross
    • Fee
    • Net
    • Description
    • Customer Name
    • Charge ID
    • Payment Method Type
  11. Then select the Download button and a copy of the report will be downloaded to your computer.
 

FAQs

I migrated from Stripe Standard, what happened to my Stripe Capital Financing?
For users that migrated from Stripe Standard to FreshBooks Payments powered by Stripe, any in-progress Stripe Capital loans from your Stripe Standard account will continue through your FreshBooks Payments powered by Stripe account. New Capital loans created after you’ve migrated to FreshBooks Payments will not be linked to your FreshBooks Payments account.
For new funding, FreshBooks has partnered with YouLend for your capital funding needs. 
Stripe Capital Details:
  • New Stripe Capital financing is not available within FreshBooks Payments at this time
  • The financing is still linked to your original Stripe Standard account including all transaction history and paydown progress
    • To view your in-progress financing, including making manual payments, log into your Stripe Standard dashboard and navigate to the Capital tab
  • New payments processed by your FreshBooks Payments powered by Stripe account will include automatic transfers to your original Stripe Standard account to pay down the financing
  • Account transfers are recorded as Adjustment transactions in your Stripe dashboard
  • For questions on your Stripe Capital loans, reach out to Stripe Support directly